BellaVista

Open-Source Visualization for Imaging-Based Spatial Transcriptomics

BellaVista is an open-source Python package developed for 10x Genomics Xenium, Vizgen MERSCOPE, and custom (home-built) MERFISH datasets utilizing napari for interactive data exploration. We developed BellaVista to help the spatial transcriptomics community explore their data and create reproducible paper-ready figures.

If you find this tool useful in your research, please cite our GitHub repository

Installation

installation.html

Get Started

get_started.html

Tutorials

tutorials.html

Figure Guide

figure_guide.html

FAQ

faq.html

API

api.html

Installation